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074:150 Medical Imaging and Radiology Informatics, Spring 2009

Time & Place:

  • If you are the University of Iowa students who registered this course, you can login on Iowa Courses Online (ICON) (icon.uiowa.edu) using your hawkeye ID. You can access interactive lecture talks and relevant lecture materials.
  • If you did not register this course or you are not UI students, you need to contact instructor, Dr. Jun Ni at jun-ni@uiowa.edu, for permission to access interactive lecture talks and other course materials.

Instructor:

Jun Ni, Ph.D., Associate Professor of Medical Imaging Informatics
Department of Radiology, Carver College of Medicine
Department of Biomedical Engineering, College of Engineering
Department of Mechanical Engineering, College of Engineering
Department of Computer Science, College of Liberal Arts
University of Iowa, Iowa City, IA, USA
Tel: (319) 335-9490
E-mail: jun-ni@uiowa.edu

Office Hours and Place:

Scheduled ICON's Chatting; or Skype: junni58

Textbook:
H.K. Huang, "PACS and Imaging Informatics," First Edition, Wiley-Liss, 2004. Prof. H.K Huang's web site at USC's Image Processing and Informatics Lab

 

 

 

 

 

Important links

:: 074:150 Course Web Site :: ICON :: ISIS :: OSIRIS (Instructor Use) ::
:: Hawkeye Radiology Informatics :: Medical Imaging HPC & Informatics ::
:: Radiation Science Program :: Radiology :: College of Medicine :: University of Iowa ::

Class Lecture Notes:

Additional notes, handouts, and any assigned reading materials may be available online at ICON or through email.

Course Description:

This course addresses the issues in the informatics used in medical imaging and radiology. Through this course learning, students will learn the basic concepts, principles, terminology, and technology in medical imaging informatics, which includes PACS system's operation, design, and implementation, digitalization and acquisition of medical images, clinic use in radiological sciences, current research and development of technologies in radiological modalities, the state-of-the-art of medical image processing, and image compression, storage, achieving, retrieving, image data formation and conversion, image data communications and network, image process workflow, image data visualization and display, system integrations in health, hospital, radiological information systems, relationship between medical imaging informatics, and cutting edge technology in computer and information science, web application/services based telemedicine and teleradiology, image date consistency and fault-tolerance in PACS, system and data security, clinic implementation and experience, data mining and decision making systems, education and training systems, enterprise systems in medical and health sciences. The course is designed for medical clinic and research fellows, residents, students in informatics, pre-medical students, and professionals in health and hospital sciences.

Pre-requisites: None

Course Contents: (the presentation materials are made and extracted from Dr. H. K Huang's textbook)

Part I: Medical Imaging Principles (Lecture starts on Jan 20, 2009)

1. Introduction

Introduction [presentation lecture 001 (PDF), movie (WMV)
Historical Developments [presentation lecture 002 (PDF), movie (WMV)]
What is PACS [presentation lecture 003 (PDF), movie (WMV)
PACS Implementation Strategies [presentation lecture 004 (PDF), movie (WMV)]
PACS Model Classifications [presentation lecture 005 (PDF), movie (WMV)]
PACS Markets [presentation lecture 006 (PDF), movie (WMV)]

2. Digital Medical Imaging Fundamentals

Basic Terminology in Medical Imaging [presentation lecture 007 (PDF), movie (WMV)]
Quality of Images [presentation lecture 008 (PDF), movie (WMV)]
Measurement of Image Quality (sharpness) [presentation lecture 009 (PDF), movie (WMV)]
Measure of Image Quality (noise) [presentation lecture 010 (PDF), movie (WMV)]

3. Digital Radiography

Principles of Conventional Projection Radiology [presentation lecture 011 (PDF), movie (WMV)]
Standard Procedure in CPR [presentation lecture 012 (PDF), movie (WMV)]
Analog Image Receptor [presentation lecture 013 (PDF), movie (WMV)]
Characteristics of Radiographic Film [presentation lecture 014 (PDF), movie (WMV)]
Digital Fluorography and Laser Film Scanner [presentation lecture 015 (PDF), movie (WMV)]
Image Plate Technology [presentation lecture 016 (PDF), movie (WMV)]
CR System Operation [presentation lecture 017 (PDF), movie (WMV)]
Background Removal Technology [presentation lecture 018 (PDF), movie (WMV)]
Full-filed Direct Digital Mammography [presentation lecture 019 (PDF), movie (WMV)]
Digital Radiology [presentation lecture 020 (PDF), movie (WMV)]

4. Medical Imaging Modalities: Computed Tomography, Magnetic Resonance, Ultrasound, Nuclear Medicine, and Light Imaging

Image Reconstruction from Image Reconstruction from Projections [presentation lecture 021 (PDF), movie (WMV)]
Algebraic Reconstruction Method [presentation lecture 022 (PDF), movie (WMV)]
Transmission X Transmission X-ray Computed ray Computed Tomography [presentation lecture 023 (PDF), movie (WMV)]
Multi Multi-slice XCT [presentation lecture 024 (PDF), movie (WMV)]
Emission Computed Emission Computed Tomography [presentation lecture 025 (PDF), movie (WMV)]
Advances in XCT/PET Scanner Advances in XCT/PET Scanner and Microimaging [presentation lecture 026 (PDF), movie (WMV)]
Nuclear Medicine [presentation lecture 027 (PDF), movie (WMV)]
Ultrasound Imaging [presentation lecture 028 (PDF), movie (WMV)]
Color Ultrasound Imaging [presentation lecture 029 (PDF), movie (WMV)]
Magnetic Resonance Imaging [presentation lecture 030 (PDF), movie (WMV)]
MRI Applications and fMRI [presentation lecture 031 (PDF), movie (WMV)]
Light Imaging [presentation lecture 032 (PDF), movie (WMV)]

5. Image Compression

Introduction [presentation lecture 033 (PDF), movie (WMV)]
Demands and Classification [presentation lecture 034 (PDF), movie (WMV)]
Error Error-Free Compression [presentation lecture 035 (PDF), movie (WMV)]
Two Two-Dimensional Irreversible
Image Compression [presentation lecture 036 (PDF), movie (WMV)]
Measurements [presentation lecture 037 (PDF), movie (WMV)]
Three Dimensional Compression [presentation lecture 038 (PDF), movie (WMV)]

Part II: PACS Fundamentals

  1. Picture Archiving and Communication System Components and Work Flow

    Introduction [presentation lecture 039(PDF), movie (WMV)]
    PACS Controller and Archive Server [presentation lecture 040 (PDF), movie (WMV)]
    PACS Infrastructure and Design Concept [presentation lecture 041(PDF), movie (WMV)]
    Generic PACS Work Flow [presentation lecture 042(PDF), movie (WMV)]
    Current PACS Architectures [presentation lecture 043(PDF), movie (WMV)]
    PACS and Teleradiology [presentation lecture 044(PDF), movie (WMV)]
    Enterprise PACS and ePR with Images [presentation lecture 045(PDF), movie (WMV)]

  2. Industrial Standards (HL7 and DICOM) and Work Flow Protocols (IHE)

    Introduction to industrial standards (HL7 and DICOM) [presentation lecture 046(PDF), movie (WMV)]
    New Trent in HL7 development [presentation lecture 047(PDF), movie (WMV)]
    History of DICOM development [presentation lecture 048(PDF), movie (WMV)]
    DICOM format [presentation lecture 049(PDF), movie (WMV)]
    Object and service classes [presentation lecture 050 (PDF), movie (WMV)]
    DICOM communication [presentation lecture 051(PDF), movie (WMV)]
    Examples of using DICOM [presentation lecture 052(PDF), movie (WMV)]
    New features in DICOM [presentation lecture 053(PDF), movie (WMV)]
    Integrated health enterprises (IHE) [presentation lecture 054 (PDF), movie (WMV)]

  3. Image Acquisition Gateway (IAG)

    Introduction to IAG [presentation lecture 055 (PDF), movie (WMV)]
    DICOM-Compliant Image Acquisition Gateway [presentation lecture 056 (PDF), movie (WMV)]
    Gateway Computer Components and Database Management [presentation lecture 057 (PDF), movie (WMV)]
    Local Image Storage [presentation lecture 058 (PDF), movie (WMV)]
    Determination of the End of Image Series [presentation lecture 059 (PDF), movie (WMV)]
    Automatic Image Recovery Scheme for DICOM Conformance Devices [presentation lecture 060 (PDF), movie (WMV)]

  4. Communications and Networking

    Basic of Compunications and Networks
    Cable Infrastructure
    Digital Communication Networks
    PACS Network Design
    Examples of PACS Networks
    Internet 2
    Wireless Networks
    Self-Scaling Networks

  5. PACS Controller and Image Archive Server

    Image Data Management Design
    PACS Controller and Archive Server Functions
    PACS Archive Server System Operations
    DICOM-Compliant PACS Archive Server
    DICOM PACS Archive Server Hardware and Software
    Backup Archive Server

  6. Display and Visualization
  7. Display Workstation
    Ergonomics of Image Workstations
    Evolution of Medical Image Display Technologies
    Types of Image Workstation
    Image Display and Measurement Functions
    Workstation User Interface and Basic Display Functions
    DICOM PC-Based Display Workstation

  8. Integration of HIS, RIS, PACS, and ePR

    Hospital Information System
    Radiology Information System
    Interfacing PACS with HIS and RIS
    Interfacing PACS with Other Medical Databases
    Electronic Patient Record (ePR)

Part III: PACS Operation

  1. PACS Data Management and Web-based Image Distribution

    PACS Data Management
    Patient Folder Managementı
    Distributed Image File Server
    Web Server
    Component-Based Web Server for Image Distribution andˇ Display

  2. Telemedicine and Teleradiology

    Introduction to Telemedicine
    Introduction to Teleradiology
    Telemammography
    Telemicroscopy
    Real-Time Teleconsultation Systemı
    Trends in Telemedicine and Teleradiologyı

  3. Fault-Tolerant PACS

    Introduction to Concept of Fault-Tolerant PACS
    PACS System Failure
    No Loss of Image Data
    No Interruption of PACS Data Flowı
    Current PACS Technology to Address Fault Tolerance
    Clinical Experiences with Archive Server Downtime
    Concept of Continuously Available PACS Designı
    CA PACS Server Design and Implementationı

  4. Image/Data Security

    Introduction to Medical Image Data Security
    Image/Data Security Method
    Digital Envelope
    DICOM Security
    HIPAA and Its Impacts on PACS Security
    PACS Security Server and Authority for Assuring Image Authenticity and Integrity
    Significance of Image Security

  5. PACS Clinical Implementation, Acceptance, Data Migration, and Evaluation

    Planning to Install a PACS
    Manufacturer's Implementation Strategy
    Template for PACS RFP
    PACS Implementation Strategy
    Implementation
    System Acceptance
    Image Data Migration
    PACS System Evaluationı

  6. PACS Clinical Experience, Pitfalls, and Bottlenecks

    Clinical Experience at Baltimore VA Medical Center
    Clinical Experience at St. John's Health Center
    PACS Pitfalls
    PACS Bottlenecks
    Pitfalls in DICOM Conformance

Part IV: PACS-Based Imaging Informatics

  1. PACS-Based Medical Imaging Informatics

    Medical Imaging Informatics Infrastructure (MIII)
    PACS-Based Medical Imaging Informatics Medical Imagingˇ Informatics Infrastructure
    CAD in PACS Environment
    Summary of MIII

  2. PACS as a Decision Support Tool

    Outcome Analysis of Lung Nodule with Temporal CTˇ Image Database
    Image Matching with Data Mining
    Bone Age Assessment with a Digital Hand Atlas

  3. ePR-Based PACS Application Servers for Other Medical Specialties

    PACS Application Server for Other Medical Specialties
    Image-Assisted Surgery System
    Radiation Therapy Server

  4. New Directions in PACS Learning and PACS-Related Training

    New Direction in PACS Education
    Changing PACS Learning with New Interactive and Media-Richˇ Learning Environments
    Interactive Digital Breast Imaging Teaching File

Part V: Enterprise PAACS

  1. Enterprise PACS

    Introduction to Enterprise PACS
    Concept of Enterprise PACS and Early Models
    Design of Enterprise-Level PACS
    An Example of an Enterprise-Level Chest TB Screening
    Summary of Enterprise PACS and Image Distribution

University of Iowa's Human Right Policy

The University of Iowa brings together in common pursuit of its educational goals persons of many nations, races, and creeds. The University is guided by the precepts that in no aspect of its programs shall there be differences in the treatment of persons because of race, creed, color, national origin, age, sex, disability, sexual orientation, gender identity, or any other classification that deprives the person of consideration as an individual, and that equal opportunity and access to facilities shall be available to all. Among the classifications that deprive the person of consideration as an individual are those based on associational preference. These principles are expected to be observed in the internal policies and practices of the University; specifically in the admission, housing, and education of students; in policies governing programs of extracurricular life and activities; and in the employment of faculty and staff personnel. The University shall work cooperatively with the community in furthering these principles.

Classroom Policy

1. A number of assignments will be given throughout the semester. These assignments require the student to read and accomplish homework or projects. Students are encouraged to discuss problems; but accomplish by him/herself. He/she can also contact the instructor through email or our instructional tools, and online office hours. Delay of handing in assigned work are not acceptable.

2. In working the assignments, each student must work on his/her own homework or projects. - under no circumstances may any part of a homework or projects be copied (electronically or manually) from one student to another. Failure to follow this rule will be treated as academic misconduct and proper disciplinary actions will be initiated.

3. The instructor needs to hear from anyone who has a disability which may require some modification of seating, testing or other class requirements so that appropriate arrangements may be made.

 

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